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Anderson, JK, Wondzell SM, Gooseff MN, Haggerty R.  2005.  Patterns in stream longitudinal profiles and implications for hyporheic exchange flow at the H.J Andrews Experimental Forest; Oregon, USA. Hydrol. Process. 19(293):2931-2949.
Argerich, A, Haggerty R, Eugènia M, Francesc S, Zarnetske JP.  Submitted.  Quantification of metabolically active transient storage (MATS) in two reaches with contrasting transient storage and ecosystem respiration. Journal Geophysical Research Biogeosciences (in revision).
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Crook, N, Binley A, Knight R, Robinson DA, Zarnetske JP, Haggerty R.  2008.  Electrical resistivity imaging of the architecture of substream sediments. Water Resour Res W00D13 doi101029WR006968 Hydrology streams network dynamics. 44 Download: Crook_et_al_2008.pdf (1.54 MB)
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Gooseff, MN, Wondzell SM, Haggerty R, Anderson JK.  2003.  Comparing transient storage modeling and residence time distribution (RTD) analysis in geomorphically varied reaches in the Lookout Creek basin, Oregon, USA. Advances in Water Resources. 26:925-937. Download: sdarticle.pdf (606.92 KB)
Gooseff, MN, LaNier J, Haggerty R, Kokkeler K.  2005.  Determining in-channel (dead zone) transient storage by comparing solute transport in a bedrock channel-alluvial channel sequence, Oregon. Water Resources Research. 41 Download: 2004WR003513.pdf (234.56 KB)
Gooseff, MN, Anderson JK, Wondzell SM, LaNier J, Haggerty R.  2006.  A modeling study of hyporheic exchange pattern and the sequence, size, and spacing of stream bedforms in mountain stream networks, Oregon, USA. Hydrological Processes. 20(11):2443-2457. Download: modelling_study_hyp_exchange_bedforms_HP06.pdf (750.81 KB)
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Haggerty, R, Martí E, Argerich A.  2008.  Development of a "smart" tracer for the assessment of microbiological activity and sediment-water interaction in natural waters: The resazurin-resorufin system. Water Resour. Res.. 44 Abstract  Download: 2007WR006670.pdf (427.47 KB)
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Ramirez, J, Thomann E, Waymire E, Haggerty R, Wood B.  2006.  A generalized Taylor-Aris formula and skew diffusion. Multiscale Modeling and Simulation: A SIAM Interdisciplinary Journal. 5(3):786-801. Abstract  Download: TaylorAris.pdf (241.38 KB)
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Zarnetske, JP, Haggerty R, Wondzell SM, Baker M.  2011.  Dynamics of Nitrate Production and Removal as a Function of Residence Time in the Hyporheic Zone.. J Geophys Res G01025. 116
Zarnetske, JP, Haggerty R, Wondzell SM, Baker M.  Submitted.  Labile Dissolved Organic Carbon Supply Controls Hyporheic Denitrification.. J Geophys Res.